STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
XM1_0016Putative transcriptional regulator, AbrB family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (507 aa)    
Predicted Functional Partners:
XM1_0037
Cytosine-specific methyltransferase; Function of strongly homologous gene; enzyme; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
  
  
  0.958
metK
Methionine adenosyltransferase 1; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.912
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.904
XM1_1991
Putative Nucleoside phosphorylase(Hopanoid-associated phosphorylase HpnG,22-224); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.902
XM1_0013
Conserved protein of unknown function (Multidrug resistance efflux transporter 5-106); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.667
XM1_0015
Putative site-specific recombinase, resolvase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.547
hmrR
Heavy metal-dependent transcriptional regulator, MerR family; Function of strongly homologous gene; regulator.
 
     0.532
cnrT
Cobalt-nickel-resistance system transmembrane protein; Function of strongly homologous gene; transporter.
 
     0.528
ccrMIM
Modification methylase CcrMI(DNA methylase N-4/N-6,25-246); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.524
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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