STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0022Conserved protein of unknown function (FabD/lysophospholipase-like domain 1-224); Homologs of previously reported genes of unknown function. (67 aa)    
Predicted Functional Partners:
XM1_0019
Putative bacteriophage-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
XM1_0020
Conserved protein of unknown function (Metallo-hydrolase/oxidoreductase 6-349); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
XM1_0021
Conserved protein of unknown function (Prok-E2_A 53-169; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
umuC
Conserved protein of unknown function; Function of strongly homologous gene; enzyme.
       0.503
XM1_0017
Putative ISRSO14-transposase orfB protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.435
XM1_0018
Putative superfamily I DNA and RNA helicase and helicase subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.435
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.