STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0027Putative pphB serine/threonine protein phosphatase or Metallo-dependent phosphatases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (96 aa)    
Predicted Functional Partners:
XM1_0028
Homologs of previously reported genes of unknown function.
       0.797
XM1_0029
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.747
XM1_0030
Type III restriction enzyme, res subunit; Function of strongly homologous gene; enzyme.
       0.729
XM1_0026
Homologs of previously reported genes of unknown function.
       0.530
parA
Conserved protein of unknown function; Function of strongly homologous gene; putative factor.
       0.523
XM1_0025
Putative DNA-directed RNA polymerase specialized sigma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.507
XM1_0032
Homologs of previously reported genes of unknown function.
       0.469
XM1_0036
Homologs of previously reported genes of unknown function.
       0.459
XM1_0035
Putative C-5 cytosine-specific DNA methylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.438
XM1_0031
Homologs of previously reported genes of unknown function.
       0.436
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.