XM1_0054 protein (Magnetospirillum sp. XM1) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

XM1_0054

Homologs of previously reported genes of unknown function. (142 aa)

Predicted Functional Partners:

XM1_0055

0.930

XM1_0056

0.930

XM1_0058

0.883

XM1_0050

0.788

XM1_0051

0.784

XM1_2604

0.784

XM1_2606

0.784

XM1_2608

0.784

XM1_2609

0.784

XM1_0042

0.781

Your Current Organism:

Magnetospirillum sp. XM1

NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
XM1_0042	XM1_0050	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.795
XM1_0042	XM1_0051	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.786
XM1_0042	XM1_0054	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.781
XM1_0042	XM1_0055	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.778
XM1_0042	XM1_0056	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.777
XM1_0042	XM1_0058	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Putative Phage-related minor tail protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	0.670
XM1_0042	XM1_2604	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.775
XM1_0042	XM1_2606	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.778
XM1_0042	XM1_2608	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.785
XM1_0042	XM1_2609	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.774
XM1_0050	XM1_0042	Homologs of previously reported genes of unknown function.	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.795
XM1_0050	XM1_0051	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.880
XM1_0050	XM1_0054	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.788
XM1_0050	XM1_0055	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.788
XM1_0050	XM1_0056	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.786
XM1_0050	XM1_0058	Homologs of previously reported genes of unknown function.	Putative Phage-related minor tail protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	0.760
XM1_0050	XM1_2604	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.786
XM1_0050	XM1_2606	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.788
XM1_0050	XM1_2608	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.788
XM1_0051	XM1_0042	Homologs of previously reported genes of unknown function.	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.786