STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0092Homologs of previously reported genes of unknown function. (153 aa)    
Predicted Functional Partners:
XM1_0091
Homologs of previously reported genes of unknown function.
 
     0.634
XM1_3072
Conserved protein of unknown function(containing NYN domain, limkain-b1-type domain.8-165); Homologs of previously reported genes of unknown function.
 
     0.614
XM1_1107
Putative SAM-dependent methyltransferases(Methyltransferase type 11,91-139); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.609
XM1_1473
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.554
XM1_2186
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.536
XM1_0089
Homologs of previously reported genes of unknown function.
       0.529
XM1_1490
Homologs of previously reported genes of unknown function.
  
     0.519
XM1_1963
Homologs of previously reported genes of unknown function.
  
     0.498
XM1_0094
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.479
XM1_0790
Homologs of previously reported genes of unknown function.
 
     0.475
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.