STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0182Homologs of previously reported genes of unknown function. (592 aa)    
Predicted Functional Partners:
flhF
Protein of unknown function (Methyl-accepting chemotaxis protein (MCP) signaling domain 365-548); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.931
fliH
Putative metal-binding protein CopG protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
     0.914
fleN
Flagellar number regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
     0.881
XM1_0183
Conserved protein of unknown function（DnaJ N-terminal domain-containing protein） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
     0.817
flhA
Conserved protein of unknown function; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
       0.792
flbD
Conserved protein of unknown function; Function of homologous gene experimentally demonstrated in an other organism; regulator.
       0.782
czcC-3
Putative Flagellar hook-length control protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
     0.771
XM1_4103
Serine/threonine protein kinase; Function of strongly homologous gene; enzyme.
  
     0.766
XM1_1531
Conserved protein of unknown function (Flagellin, D0/D1 domain); Homologs of previously reported genes of unknown function.
  
     0.762
XM1_1602
Homologs of previously reported genes of unknown function.
  
     0.762
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.