STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0183Conserved protein of unknown function（DnaJ N-terminal domain-containing protein） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (499 aa)    
Predicted Functional Partners:
hscA
DnaK-like molecular chaperone specific for IscU; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
 
 0.936
dnaK
Chaperone Hsp70, co-chaperone with DnaJ; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.929
htpG
Molecular chaperone HSP90 family; Molecular chaperone. Has ATPase activity.
  
 0.885
XM1_2231
Putative Molecular chaperone; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
 0.884
grpE
Protein GrpE, Heat Shock Chaperone (HSP-70 cofactor); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction [...]
 
 
 0.873
XM1_3682
Homologs of previously reported genes of unknown function.
  
 
 0.835
XM1_0182
Homologs of previously reported genes of unknown function.
 
     0.817
hmrR
Heavy metal-dependent transcriptional regulator, MerR family; Function of strongly homologous gene; regulator.
  
 0.812
XM1_2050
Putative Predicted membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 
   0.803
XM1_3056
Conserved protein of unknown function(containing CHAT domain,876-1217); Homologs of previously reported genes of unknown function.
  
 
 0.798
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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