STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0198Homologs of previously reported genes of unknown function. (1443 aa)    
Predicted Functional Partners:
XM1_1567
Putative O-linked N-acetylglucosamine transferase (Tetratricopeptide-like helical,25-167); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.700
XM1_1568
Putative O-linked N-acetylglucosamine transferase(Tetratricopeptide-like helical,22-197); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.689
XM1_4304
Conserved protein of unknown function (Concanavalin A-like lectin/glucanases superfamily; Homologs of previously reported genes of unknown function.
 
  
 0.656
XM1_2364
Homologs of previously reported genes of unknown function.
  
     0.595
XM1_3664
Conserved protein of unknown function(containing EF-hand-like domain,202-221); Homologs of previously reported genes of unknown function.
  
     0.594
XM1_2337
Homologs of previously reported genes of unknown function.
  
     0.538
XM1_3698
O-linked N-acetylglucosamine transferase; Function of strongly homologous gene; enzyme.
 
   
 0.536
XM1_2360
Putative CheY-like receiver; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
     0.529
XM1_2128
Homologs of previously reported genes of unknown function.
  
     0.524
XM1_4578
Putative cadherin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 
 
 0.515
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.