STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psdPhosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (235 aa)    
Predicted Functional Partners:
pssA
CDP-diacylglycerol--serine O-phosphatidyltransferase; Function of strongly homologous gene; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.997
XM1_0069
Putative phospholipase D (PLD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.924
XM1_2969
Putative endonuclease precursor with phospholipase D-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.924
XM1_4741
Putative endonuclease precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.924
XM1_3709
Glutamate decarboxylase-like PLP-dependent protein; Function of strongly homologous gene; enzyme.
   
 
 0.614
pgsA
Cardiolipin synthase (CMP-forming); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.607
nnrE
Conserved protein of unknown function; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the r [...]
  
    0.560
XM1_0215
Homologs of previously reported genes of unknown function.
       0.544
XM1_0218
Putative Outer membrane protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
    0.507
cdsA
Phosphatidate cytidylyltransferase; Function of strongly homologous gene; enzyme; Belongs to the CDS family.
     
 0.448
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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