STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0271Conserved protein of unknown function,containing haemolysin-type calcium-binding domain NodA; Homologs of previously reported genes of unknown function. (1838 aa)    
Predicted Functional Partners:
XM1_0273
Putative ABC-type protease/lipase transport system, ATPase and permease component protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.930
XM1_0272
Putative Type I secretion system membrane fusion protein PrsE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
  
 0.878
XM1_4578
Putative cadherin-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 
 0.830
XM1_3771
RTX toxins and related Ca2+-binding protein; Function of strongly homologous gene; receptor.
 
 
 0.826
XM1_4427
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 
 0.803
XM1_0274
Conserved protein of unknown function, containing Outer membrane efflux protein domain; Homologs of previously reported genes of unknown function.
 
  
 0.772
XM1_3063
Conserved protein of unknown function(containing Exostosin-like domain,148-233); Homologs of previously reported genes of unknown function.
  
     0.757
XM1_4304
Conserved protein of unknown function (Concanavalin A-like lectin/glucanases superfamily; Homologs of previously reported genes of unknown function.
 
  
0.757
XM1_4580
Putative cadherin like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
     0.744
XM1_4209
Putative adenylate cyclase (Partial); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.724
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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