STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0331Putative metal-dependent carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. (512 aa)    
Predicted Functional Partners:
XM1_0328
Putative argK, membrane ATPase/protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.760
XM1_0329
Homologs of previously reported genes of unknown function.
       0.760
XM1_0330
Homologs of previously reported genes of unknown function.
       0.752
elbB
Isoprenoid biosynthesis protein with amidotransferase-like domain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.597
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.557
rpsO
30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.550
XM1_0327
Conserved protein of unknown function（Chemotaxis phosphatase, CheZ） Homologs of previously reported genes of unknown function.
       0.541
XM1_3678
Putative oligoendopeptidase F; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.524
XM1_1991
Putative Nucleoside phosphorylase(Hopanoid-associated phosphorylase HpnG,22-224); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.407
XM1_4783
Putative serine/threonine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.407
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.