STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lutCLactate utilization protein C; Function of strongly homologous gene; enzyme. (218 aa)    
Predicted Functional Partners:
lutB
L-lactate dehydrogenase complex protein LldF; Function of strongly homologous gene; enzyme.
 
 
 0.998
lutA
Lactate utilization protein A, （Fe-S oxidoreductase subunit） Function of strongly homologous gene; enzyme.
 
 
 0.987
XM1_0350
Putative D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
 
 
 0.980
lldP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.873
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.848
XM1_2010
Putative Fe-S oxidoreductase; Function of strongly homologous gene; putative enzyme.
 
 
 0.800
XM1_0346
Transcriptional regulator; Function of strongly homologous gene; regulator.
 
   
 0.708
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.660
hmeD
Hdr-like menaquinol oxidoreductase iron-sulfur subunit 2 (DsrK); Function of strongly homologous gene; enzyme.
  
 
 0.629
XM1_0351
Putative Enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.588
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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