XM1_0403 protein (Magnetospirillum sp. XM1) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

XM1_0403

Homologs of previously reported genes of unknown function. (197 aa)

Predicted Functional Partners:

XM1_0404

0.784

XM1_0405

0.620

XM1_0406

0.612

XM1_0407

0.460

polA

0.460

Your Current Organism:

Magnetospirillum sp. XM1

NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
XM1_0403	XM1_0404	XM1_0403	XM1_0404	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.784
XM1_0403	XM1_0405	XM1_0403	XM1_0405	Homologs of previously reported genes of unknown function.	Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.620
XM1_0403	XM1_0406	XM1_0403	XM1_0406	Homologs of previously reported genes of unknown function.	Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.612
XM1_0403	XM1_0407	XM1_0403	XM1_0407	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.460
XM1_0403	polA	XM1_0403	XM1_0408	Homologs of previously reported genes of unknown function.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.460
XM1_0404	XM1_0403	XM1_0404	XM1_0403	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.784
XM1_0404	XM1_0405	XM1_0404	XM1_0405	Homologs of previously reported genes of unknown function.	Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.620
XM1_0404	XM1_0406	XM1_0404	XM1_0406	Homologs of previously reported genes of unknown function.	Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.612
XM1_0404	XM1_0407	XM1_0404	XM1_0407	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.460
XM1_0404	polA	XM1_0404	XM1_0408	Homologs of previously reported genes of unknown function.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.460
XM1_0405	XM1_0403	XM1_0405	XM1_0403	Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.620
XM1_0405	XM1_0404	XM1_0405	XM1_0404	Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.620
XM1_0405	XM1_0406	XM1_0405	XM1_0406	Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.835
XM1_0405	XM1_0407	XM1_0405	XM1_0407	Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Homologs of previously reported genes of unknown function.	0.721
XM1_0405	polA	XM1_0405	XM1_0408	Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.767
XM1_0406	XM1_0403	XM1_0406	XM1_0403	Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Homologs of previously reported genes of unknown function.	0.612
XM1_0406	XM1_0404	XM1_0406	XM1_0404	Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Homologs of previously reported genes of unknown function.	0.612
XM1_0406	XM1_0405	XM1_0406	XM1_0405	Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.835
XM1_0406	XM1_0407	XM1_0406	XM1_0407	Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Homologs of previously reported genes of unknown function.	0.668
XM1_0406	polA	XM1_0406	XM1_0408	Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.648