STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0407Homologs of previously reported genes of unknown function. (67 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.865
XM1_0405
Putative lysophospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.721
XM1_0406
Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.668
XM1_4389
Cell shape determining protein MreD; Function of strongly homologous gene; structure.
  
     0.638
XM1_1420
Uncharacterized protein; Homologs of previously reported genes of unknown function.
  
     0.636
XM1_4438
Homologs of previously reported genes of unknown function.
  
     0.611
XM1_3702
Protein of unknown function; No homology to any previously reported sequences.
  
     0.571
XM1_1419
Homologs of previously reported genes of unknown function.
  
     0.564
XM1_1442
Putative FOG: TPR repeat(Tetratricopeptide-like helica,65-237); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
     0.564
XM1_0597
Homologs of previously reported genes of unknown function.
  
     0.542
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.