STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0414Putative Glycosyltransferase involved in cell wall biogenesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (247 aa)    
Predicted Functional Partners:
XM1_1648
Putative Cell wall biosynthesis glycosyltransferase(Glycosyl transferase, family 2,5-165); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 
0.916
XM1_1099
Putative Glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.835
accA
acetyl-CoA carboxylase, carboxytransferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
       0.784
XM1_0413
Homologs of previously reported genes of unknown function.
 
   
 0.770
XM1_1001
Glycosyl transferase, family 2; Function of strongly homologous gene; enzyme.
 
     0.727
XM1_0412
Putative periplasmic or secreted lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein.
  
    0.695
XM1_1011
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.667
XM1_0416
Conserved protein of unknown function （Hydrolase of the alpha/beta superfamily） Homologs of previously reported genes of unknown function.
     
 0.626
XM1_0151
Putative C-5 cytosine-specific DNA methylase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.566
XM1_0411
Homologs of previously reported genes of unknown function.
       0.527
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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