STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0421Homologs of previously reported genes of unknown function. (201 aa)    
Predicted Functional Partners:
XM1_1868
Homologs of previously reported genes of unknown function.
  
     0.767
XM1_1120
Putative TRAP-type uncharacterized transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.746
XM1_1972
Homologs of previously reported genes of unknown function.
  
     0.739
XM1_2052
Homologs of previously reported genes of unknown function.
  
     0.683
XM1_4513
Conserved protein of unknown function (Staphylococcal nuclease 40-167); Homologs of previously reported genes of unknown function.
  
     0.657
XM1_3092
Protein of unknown function; No homology to any previously reported sequences.
  
     0.648
XM1_3093
Putative Acetyltransferase, GNAT family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.610
XM1_0773
Homologs of previously reported genes of unknown function.
  
     0.608
XM1_1335
Homologs of previously reported genes of unknown function.
  
     0.582
XM1_3060
Putative sel1-like repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phenotype.
  
     0.576
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.