STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0433Homologs of previously reported genes of unknown function. (186 aa)    
Predicted Functional Partners:
XM1_0434
Conserved protein of unknown function, putative NUDIX hydrolase domain; Homologs of previously reported genes of unknown function.
       0.828
XM1_0432
Putative ATPase (MoxR-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.722
XM1_0435
Putative tRNA nucleotidyltransferase/poly(A) polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.666
XM1_0431
Putative ATP-dependent helicase/nuclease subunit A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the helicase family. UvrD subfamily.
 
     0.633
XM1_1491
Homologs of previously reported genes of unknown function.
 
     0.522
XM1_1490
Homologs of previously reported genes of unknown function.
 
     0.498
XM1_0430
Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.460
XM1_4215
Homologs of previously reported genes of unknown function; Belongs to the UPF0262 family.
  
     0.459
XM1_1492
Homologs of previously reported genes of unknown function.
 
     0.441
XM1_2216
Homologs of previously reported genes of unknown function.
  
     0.438
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.