STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0461Putative Site-specific DNA methylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (278 aa)    
Predicted Functional Partners:
XM1_2831
Protein of unknown function; No homology to any previously reported sequences.
  
  
  0.968
XM1_4095
D12 class N6 adenine-specific DNA methyltransferase; Function of strongly homologous gene; enzyme.
  
  
 
0.929
XM1_2957
Putative site-specific DNA methylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.901
XM1_0462
Protein of unknown function; No homology to any previously reported sequences.
       0.572
XM1_0038
Putative dna modification methylase protein (phage related); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.541
XM1_0037
Cytosine-specific methyltransferase; Function of strongly homologous gene; enzyme; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
   
 0.509
XM1_0048
Conserved protein of unknown function (phage related); Homologs of previously reported genes of unknown function.
 
    0.498
XM1_0460
Homologs of previously reported genes of unknown function.
  
    0.445
ccrMIM
Modification methylase CcrMI(DNA methylase N-4/N-6,25-246); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.432
XM1_4071
Putative Mu-like prophage FluMu protein gp28; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
    0.400
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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