STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0483Homologs of previously reported genes of unknown function. (98 aa)    
Predicted Functional Partners:
XM1_0484
Protein of unknown function; No homology to any previously reported sequences.
 
 
   0.967
XM1_0190
Conserved protein of unknown function (GCN5-related N-acetyltransferase domain); Homologs of previously reported genes of unknown function.
 
 
 
 0.920
XM1_0487
Conserved protein of unknown function (GCN5-related N-acetyltransferase domain); Homologs of previously reported genes of unknown function.
 
 
   0.907
XM1_0482
Protein of unknown function; No homology to any previously reported sequences.
       0.560
istA-2
Transposase; Function of strongly homologous gene; enzyme.
       0.535
XM1_0486
Putative Insertion sequence IS21 ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.535
XM1_0338
Putative acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.484
XM1_0561
Putative Histone acetyltransferase HPA2-like acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.484
rimI
Ribosomal-protein-alanine acetyltransferase; Function of strongly homologous gene; enzyme.
   
 
 0.484
XM1_1409
Conserved protein of unknown function(Acyl-CoA N-acyltransferase,11-157); Homologs of previously reported genes of unknown function.
   
 
 0.484
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.