STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0487Conserved protein of unknown function (GCN5-related N-acetyltransferase domain); Homologs of previously reported genes of unknown function. (120 aa)    
Predicted Functional Partners:
XM1_0483
Homologs of previously reported genes of unknown function.
 
 
   0.907
XM1_0484
Protein of unknown function; No homology to any previously reported sequences.
     0.867
XM1_0191
Homologs of previously reported genes of unknown function.
 
 
   0.862
XM1_0486
Putative Insertion sequence IS21 ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.507
XM1_0185
Putative lipid carrier protein（sterol-binding domain） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
  
 0.502
istA-2
Transposase; Function of strongly homologous gene; enzyme.
       0.490
XM1_2760
Putative Histone deacetylase superfamily protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.420
XM1_0488
Conserved protein of unknown function （Phage_integrase fragment） Homologs of previously reported genes of unknown function; Belongs to the 'phage' integrase family.
       0.400
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.