STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0488Conserved protein of unknown function （Phage_integrase fragment） Homologs of previously reported genes of unknown function; Belongs to the 'phage' integrase family. (438 aa)    
Predicted Functional Partners:
XM1_2052
Homologs of previously reported genes of unknown function.
  
    0.726
XM1_1625
Homologs of previously reported genes of unknown function.
  
     0.724
XM1_0773
Homologs of previously reported genes of unknown function.
  
     0.723
XM1_0585
Homologs of previously reported genes of unknown function.
  
     0.721
XM1_0710
Homologs of previously reported genes of unknown function.
  
     0.711
XM1_4513
Conserved protein of unknown function (Staphylococcal nuclease 40-167); Homologs of previously reported genes of unknown function.
 
     0.710
XM1_2050
Putative Predicted membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
     0.702
XM1_4566
Conserved protein of unknown function (Cytochrome b561, bacterial/Ni-hydrogenase 2-189); Homologs of previously reported genes of unknown function.
  
     0.692
XM1_0499
Integrase; Function of strongly homologous gene; enzyme.
  
   
 0.671
XM1_1602
Homologs of previously reported genes of unknown function.
  
     0.661
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.