STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0545Putative HPr kinase/phosphorylase, regulates carbohydrate metabolism; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (143 aa)    
Predicted Functional Partners:
npr
Phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 
 0.946
ptsI
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
   
 0.941
XM1_0544
Conserved protein of unknown function (containing ATPase/P-loop-containing domain); Displays ATPase and GTPase activities.
    
 0.937
XM1_0543
Phosphotransferase system, mannose/fructose-specific component IIA; Function of strongly homologous gene; transporter.
 
   
 0.847
ptsP
Fused PTS enzyme: PEP-protein phosphotransferase (enzyme I); Function of strongly homologous gene; enzyme; Belongs to the PEP-utilizing enzyme family.
  
     0.708
gamA
Glucosamine-6-phosphate deaminase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.691
ptsN
Nitrogen PTS system EIIA component; Function of strongly homologous gene; transporter.
 
  
 0.673
ydbK
Putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
   0.627
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
  
 0.612
XM1_0540
Conserved protein of unknown function (RmlC-like cupin domain); Homologs of previously reported genes of unknown function.
       0.547
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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