STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0551Homologs of previously reported genes of unknown function. (309 aa)    
Predicted Functional Partners:
XM1_0608
Putative polysaccharide deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.720
fliL
Flagellar basal body-associated protein fliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
 
 0.626
XM1_0552
Putative iron-sulfur cluster scaffold, NifU-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.573
XM1_1532
Putative Flagellar hook-associated protein(Flagellar hook-associated protein, FlgK,7-365); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the flagella basal body rod proteins family.
 
  
 0.492
flgH
Flagellar L-ring protein flgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.486
flgI
Flagellar basal body P-ring protein(Flagellar P-ring protein,41-391); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.481
XM1_4469
Homologs of previously reported genes of unknown function.
  
     0.455
XM1_1427
Putative Antifreeze glycopeptide polyprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
 
   0.451
flgA
Flagellar basal body P-ring biosynthesis protein FlgA; Function of strongly homologous gene; structure.
 
  
 0.450
czcA-2
Putative Flagellar hook protein FlgE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
  
 0.447
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.