STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0580Putative cobalt transport protein CbiM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (199 aa)    
Predicted Functional Partners:
XM1_0578
Putative ABC-type cobalt transport system, permease component CbiQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.998
XM1_0577
Putative ABC transporter ATP-binding protein BAB1_1388; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.996
XM1_0581
Putative ABC-type Co2+ transport system, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.991
XM1_1204
Putative Cobalt transport protein CbiQ(ABC transporter CbiQ family,20-206); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.969
XM1_0579
ABC-type Co2+ transport system permease component-like protein; Function of strongly homologous gene; transporter.
 
    0.962
XM1_1205
ABC transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.941
cbiN
Cobalt transport protein CbiN(Cobalt transport protein CbiN,6-71); Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
  
 
 0.902
cbiM
Cobalt transport protein CbiM(Cobalamin (vitamin B12) biosynthesis protein CbiM,1-209); Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
     
  0.900
XM1_1794
Uncharacterized protein; Homologs of previously reported genes of unknown function.
 
  
 0.884
cobJ
Uncharacterized protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.852
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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