STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0596Homologs of previously reported genes of unknown function. (224 aa)    
Predicted Functional Partners:
XM1_0597
Homologs of previously reported genes of unknown function.
 
     0.843
XM1_0595
Putative Sugar kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.619
XM1_1976
Homologs of previously reported genes of unknown function.
  
     0.604
bipA
GTP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; factor.
       0.590
XM1_0556
Homologs of previously reported genes of unknown function.
  
     0.553
XM1_3974
Putative disulfide bond formation protein DsbB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.542
XM1_1981
Homologs of previously reported genes of unknown function.
  
     0.525
XM1_0555
Putative Universal stress protein UspA-like nucleotide-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
     0.511
XM1_1943
Putative Transcriptional regulatory protein prrA（CheY-like superfamily,138-223） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.507
XM1_3526
Ribonuclease T2; Function of strongly homologous gene; enzyme; Belongs to the RNase T2 family.
  
     0.507
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.