STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0636Homologs of previously reported genes of unknown function. (69 aa)    
Predicted Functional Partners:
XM1_0635
Homologs of previously reported genes of unknown function.
       0.514
XM1_1199
Conserved exported protein of unknown function(Ysc84 actin-binding domain,100-220); Homologs of previously reported genes of unknown function.
   
    0.493
XM1_2121
Homologs of previously reported genes of unknown function.
   
    0.483
XM1_2793
Homologs of previously reported genes of unknown function.
  
    0.420
XM1_1187
Homologs of previously reported genes of unknown function.
   
    0.407
XM1_4274
Conserved protein of unknown function （AsmA 3-209） Homologs of previously reported genes of unknown function.
   
    0.407
XM1_0412
Putative periplasmic or secreted lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein.
  
    0.404
XM1_0805
Conserved protein of unknown function (Transport-associated and nodulation domain 129-192); Homologs of previously reported genes of unknown function.
  
    0.404
XM1_3246
Conserved exported protein of unknown function(containing BON domain,135-195); Homologs of previously reported genes of unknown function.
  
    0.404
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.