STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0658Putative cation/proton antiporter, Na+/H+ exchanger family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (828 aa)    
Predicted Functional Partners:
XM1_0013
Conserved protein of unknown function (Multidrug resistance efflux transporter 5-106); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.831
XM1_0028
Homologs of previously reported genes of unknown function.
   
 0.831
XM1_3665
Suppressor protein SRP40; Function of strongly homologous gene; regulator.
   
 0.830
XM1_0659
Conserved protein of unknown function （contain Sensor protein CheY-like domain） Homologs of previously reported genes of unknown function.
   
 
 0.746
XM1_1241
Putative Small-conductance mechanosensitive channel (Mechanosensitive ion channel MscS,211-410); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.613
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.606
XM1_0611
Homologs of previously reported genes of unknown function.
   
 
 0.606
XM1_2325
Homologs of previously reported genes of unknown function.
   
 
 0.606
XM1_4348
Glutathione-regulated potassium-efflux system protein kefB; Function of strongly homologous gene; transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.606
XM1_1469
P-type Ca2+ transporter type 2C; Function of strongly homologous gene; transporter.
   
 
 0.602
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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