STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0735Putative Cell division protein (cell division ABC transporter FtsX fragment) Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (298 aa)    
Predicted Functional Partners:
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
 
 0.993
XM1_0736
Homologs of previously reported genes of unknown function.
 
     0.919
XM1_1232
Putative Membrane-bound metallopeptidase(Duplicated hybrid motif,292-496) Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 
 0.856
XM1_1478
Putative Sensor protein gacS(CheY-like superfamily,782-900;905-1026;1045-1177); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   
 
 0.798
XM1_0738
Protein of unknown function; No homology to any previously reported sequences.
       0.773
XM1_1255
Homologs of previously reported genes of unknown function.
  
     0.692
XM1_4215
Homologs of previously reported genes of unknown function; Belongs to the UPF0262 family.
  
     0.671
ftsQ
Cell division protein FtsQ(Cell division protein FtsQ/DivIB,172-288) Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 
 0.665
XM1_0668
Homologs of previously reported genes of unknown function.
  
     0.656
XM1_0182
Homologs of previously reported genes of unknown function.
  
     0.652
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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