STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0775Homologs of previously reported genes of unknown function. (128 aa)    
Predicted Functional Partners:
XM1_0774
Putative lipopolysaccharide core biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.865
XM1_0773
Homologs of previously reported genes of unknown function.
 
     0.850
XM1_0772
Putative ADP-heptose:LPS heptosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.768
XM1_0776
Homologs of previously reported genes of unknown function.
       0.623
XM1_0125
Putative ATPase involved in chromosome partitioning; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.589
XM1_3169
Putative ribosomal RNA small subunit methyltransferase C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the methyltransferase superfamily.
  
     0.484
benK
Benzoate transport protein; Function of strongly homologous gene; putative transporter.
       0.449
XM1_3481
4Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; carrier.
  
   0.416
XM1_0777
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; 8449900.
       0.409
XM1_0778
Homologs of previously reported genes of unknown function.
       0.409
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.