STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0782Putative periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (297 aa)    
Predicted Functional Partners:
rcp
Response regulator rcp1; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
    0.774
XM1_2307
Putative ABC-type phosphate/phosphonate transport system (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.774
XM1_0781
Conserved protein of unknown function（contain Histidine kinase-like domain） Homologs of previously reported genes of unknown function.
       0.773
XM1_4343
Putative ABC-type phosphate/phosphonate transport system, periplasmic component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.505
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.432
XM1_2845
Putative peptidase cysteine/serine, trypsin-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.430
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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