STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0826Homologs of previously reported genes of unknown function. (219 aa)    
Predicted Functional Partners:
XM1_0825
Putative Membrane-bound lytic murein transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.828
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
 
     0.794
XM1_3496
Conserved protein of unknown function(containing DUF1013 domian,34-169); Homologs of previously reported genes of unknown function.
  
     0.722
XM1_0823
Conserved protein of unknown function (contain Smr/MutS related domains); Homologs of previously reported genes of unknown function.
       0.670
yidC
Putative Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
     0.669
XM1_0827
Putative FxsA cytoplasmic membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
       0.663
XM1_3118
Conserved protein of unknown function(containing Azospirillum phage Cd, Gp10 domain,13-85); Homologs of previously reported genes of unknown function.
  
     0.622
XM1_3546
Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.619
XM1_1173
Homologs of previously reported genes of unknown function.
  
     0.606
XM1_0824
Homologs of previously reported genes of unknown function.
       0.601
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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