STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsmGRibosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (210 aa)    
Predicted Functional Partners:
mnmE
tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
  
 0.982
mnmG
Glucose-inhibited cell-division protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
  
  
 0.975
parA-2
Chromosome partitioning protein ParA; Function of homologous gene experimentally demonstrated in an other organism; factor.
  
  
 0.882
parB-2
Chromosome-partitioning protein ParB; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the ParB family.
  
  
 0.808
XM1_0843
Ferredoxin, 2Fe-2S; Function of strongly homologous gene; enzyme.
       0.728
XM1_0842
Homologs of previously reported genes of unknown function.
       0.722
XM1_3349
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.721
XM1_3350
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.721
XM1_4518
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.721
XM1_0038
Putative dna modification methylase protein (phage related); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
  
  
 0.680
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.