STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0856Putative peptidase S16, lon N-terminal; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (219 aa)    
Predicted Functional Partners:
XM1_0855
Putative Thioredoxin domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.862
XM1_0857
Homologs of previously reported genes of unknown function; Belongs to the UPF0434 family.
       0.812
XM1_0858
Homologs of previously reported genes of unknown function.
       0.812
ybaK
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.763
moeB
Molybdopterin synthase sulfurylase; Function of strongly homologous gene; enzyme.
    
 0.642
XM1_0062
Protein of unknown function; Homologs of previously reported genes of unknown function.
    
  0.471
XM1_1934
Homologs of previously reported genes of unknown function.
  
     0.419
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.