STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0874Homologs of previously reported genes of unknown function. (423 aa)    
Predicted Functional Partners:
XM1_0218
Putative Outer membrane protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
 
 0.843
XM1_4468
Homologs of previously reported genes of unknown function.
  
 
   0.787
XM1_3226
Conserved protein of unknown function (containing membrane protein (OmpH-like) domain,23-184); Homologs of previously reported genes of unknown function.
  
 
 0.775
XM1_1247
Homologs of previously reported genes of unknown function.
  
     0.768
XM1_3633
Protein of unknown function; No homology to any previously reported sequences.
  
 
   0.768
XM1_4469
Homologs of previously reported genes of unknown function.
  
 
 
 0.765
XM1_0668
Homologs of previously reported genes of unknown function.
  
     0.760
XM1_0870
Homologs of previously reported genes of unknown function.
  
     0.758
XM1_1427
Putative Antifreeze glycopeptide polyprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
  
 0.758
XM1_3702
Protein of unknown function; No homology to any previously reported sequences.
  
     0.756
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.