STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0895Homologs of previously reported genes of unknown function; Belongs to the DegT/DnrJ/EryC1 family. (362 aa)    
Predicted Functional Partners:
XM1_0893
Homologs of previously reported genes of unknown function.
     0.948
XM1_0894
Homologs of previously reported genes of unknown function.
 
    0.929
XM1_0889
Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.787
XM1_0892
Putative Asparagine synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.785
XM1_0774
Putative lipopolysaccharide core biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.774
XM1_0773
Homologs of previously reported genes of unknown function.
 
   
 0.765
XM1_1531
Conserved protein of unknown function (Flagellin, D0/D1 domain); Homologs of previously reported genes of unknown function.
 
   
 0.752
XM1_4202
Conserved protein of unknown function (Integrase-like, catalytic core 247-449); Homologs of previously reported genes of unknown function.
  
     0.721
XM1_2915
Homologs of previously reported genes of unknown function.
  
     0.697
cpsB
Mannose-1-phosphate guanyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.693
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.