STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0898Conserved protein of unknown function （contain Radical_SAM domain） Homologs of previously reported genes of unknown function. (499 aa)    
Predicted Functional Partners:
XM1_0903
Conserved protein of unknown function （contain B12-binding and Radical SAM domain） Homologs of previously reported genes of unknown function.
 
  
 
0.834
XM1_0896
Putative Mannose-1-phosphate guanyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
       0.773
XM1_0899
Protein of unknown function; No homology to any previously reported sequences.
       0.773
XM1_0962
Conserved protein of unknown function (B12 binding domain 18-144; Homologs of previously reported genes of unknown function.
  
  
 
0.754
XM1_1016
Protein of unknown function; No homology to any previously reported sequences.
  
  
 
0.754
XM1_1809
Putative Radical SAM domain-containing protein(Radical SAM, alpha/beta horseshoe,221-414); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
  
 
0.753
XM1_0900
Putative dimethyl sulfoxide reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.534
XM1_0901
Protein of unknown function; No homology to any previously reported sequences.
       0.496
XM1_1382
Conserved protein of unknown function（Polyphosphate:AMP phosphotransferase,2-501） Homologs of previously reported genes of unknown function.
   
    0.416
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.