STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0900Putative dimethyl sulfoxide reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (683 aa)    
Predicted Functional Partners:
XM1_3045
Cytochrome b subunit of the bc complex; Function of strongly homologous gene; enzyme.
  
 
 0.786
XM1_0901
Protein of unknown function; No homology to any previously reported sequences.
       0.773
napB
Nitrate reductase cytochrome c-type subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
 
 0.723
padI
NADH-dependent phenylglyoxylate dehydrogenase subunit beta; Function of strongly homologous gene; enzyme.
 
 
 0.713
gltB
Glutamate synthase (NADPH) large chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.711
gltB-3
Glutamate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.711
dmsB
Anaerobic dimethyl sulfoxide reductase chain B; Function of strongly homologous gene; enzyme.
 
 
 0.688
hybB
Function of strongly homologous gene; carrier.
  
 
 0.687
XM1_2735
Putative formate-dependent nitrite reductase, 4Fe4S subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
 
 0.686
XM1_4255
Putative Hdr-like menaquinol oxidoreductase integral membrane subunit (HmeB/DsrP); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
 
 0.684
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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