STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0950Putative phosphonopyruvate decarboxylase or sulfopyruvate decarboxylase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (160 aa)    
Predicted Functional Partners:
XM1_0951
Putative phosphonopyruvate decarboxylase or sulfopyruvate decarboxylase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
 0.994
pepM
Phosphoenolpyruvate phosphomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.869
XM1_0896
Putative Mannose-1-phosphate guanyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.746
XM1_0952
Conserved protein of unknown function (RmlC-like cupid domain 44-151); Homologs of previously reported genes of unknown function.
       0.614
XM1_0953
Putative dTDP-glucose 4,6-dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.583
XM1_0961
Putative nucleotide-diphospho-sugar transferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.580
ytsJ
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
    0.579
dme
NAD-dependent malic enzyme; Function of strongly homologous gene; putative enzyme.
   
    0.579
XM1_0955
UDP-N-acetylglucosamine 2-epimerase; Function of strongly homologous gene; enzyme.
       0.564
XM1_0954
Putative pyridoxal phosphate-dependent aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
       0.559
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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