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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
XM1_0960Putative UDP-glucuronic acid decarboxylase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (298 aa)    
Predicted Functional Partners:
XM1_0991
Nucleoside-diphosphate-sugar epimerase; Function of strongly homologous gene; enzyme.
  
  
  0.973
XM1_0980
Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
  0.963
XM1_1805
Putative NAD-dependent epimerase/dehydratase(NAD(P)-binding domain,1-204); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
  0.959
rkpK
UDP-glucose 6-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.957
XM1_0917
Putative NAD-dependent epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
  0.931
galE-2
UDP-glucose 4-epimerase; Function of strongly homologous gene; enzyme.
  
  
 
0.924
gtaB
UTP--glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.906
galU
UTP--glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.906
XM1_0961
Putative nucleotide-diphospho-sugar transferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.865
XM1_0955
UDP-N-acetylglucosamine 2-epimerase; Function of strongly homologous gene; enzyme.
 
  
 0.834
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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