STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0963Homologs of previously reported genes of unknown function. (686 aa)    
Predicted Functional Partners:
XM1_0964
CMP-N-acetylneuraminic acid synthetase; Function of strongly homologous gene; enzyme.
       0.784
XM1_0962
Conserved protein of unknown function (B12 binding domain 18-144; Homologs of previously reported genes of unknown function.
       0.779
neuB
N-acetylneuraminate synthase neuB; Function of strongly homologous gene; enzyme.
       0.552
neuA
N-acylneuraminate cytidylyltransferase neuA; Function of strongly homologous gene; enzyme.
       0.549
XM1_0968
Homologs of previously reported genes of unknown function.
       0.538
XM1_0955
UDP-N-acetylglucosamine 2-epimerase; Function of strongly homologous gene; enzyme.
       0.521
XM1_0956
Putative N,N'-diacetyllegionaminic acid synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.521
XM1_0957
Putative SAM-dependent methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.521
XM1_0958
Putative putative PHP hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.521
XM1_0959
Putative carbamoyl phosphate synthase-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.521
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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