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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0975Putative D-3-phosphoglycerate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (318 aa)    
Predicted Functional Partners:
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
 
 0.980
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
 0.907
gpmA
Phosphoglyceromutase; Function of strongly homologous gene; enzyme; Belongs to the phosphoglycerate mutase family.
  
 
 0.905
hisC
Histidinol-phosphate aminotransferase; Function of strongly homologous gene; enzyme.
 
   0.851
fabG
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Function of strongly homologous gene; enzyme.
 
 
 0.850
XM1_0971
Putative dehydrogenase and related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.837
XM1_0974
3-dehydroquinate synthetase; Function of strongly homologous gene; enzyme.
  
  
 0.823
XM1_0970
Myo-inositol 2-dehydrogenase; Function of strongly homologous gene; enzyme.
 
   
 0.794
kdsB-2
3-deoxy-manno-octulosonate cytidylyltransferase; Function of strongly homologous gene; enzyme.
       0.783
neuB
N-acetylneuraminate synthase neuB; Function of strongly homologous gene; enzyme.
   
   0.774
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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