STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0980Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (315 aa)    
Predicted Functional Partners:
XM1_0917
Putative NAD-dependent epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
  0.974
XM1_1805
Putative NAD-dependent epimerase/dehydratase(NAD(P)-binding domain,1-204); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
  0.968
XM1_0960
Putative UDP-glucuronic acid decarboxylase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
  0.963
rkpK
UDP-glucose 6-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.953
XM1_0991
Nucleoside-diphosphate-sugar epimerase; Function of strongly homologous gene; enzyme.
  
  
 
0.928
galE-2
UDP-glucose 4-epimerase; Function of strongly homologous gene; enzyme.
  
  
 
0.926
galU
UTP--glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.921
gtaB
UTP--glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.920
XM1_0983
Glycosyltransferase; Function of strongly homologous gene; enzyme.
 
 
 0.900
rfbF
Glucose-1-phosphate cytidylyltransferase; Function of strongly homologous gene; enzyme.
 
 
 0.887
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.