STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_0983Glycosyltransferase; Function of strongly homologous gene; enzyme. (296 aa)    
Predicted Functional Partners:
XM1_0980
Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.900
XM1_0982
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme; Function of strongly homologous gene; enzyme.
 
  
 0.870
XM1_0981
Nucleoside-diphosphate-sugar epimerase; Function of strongly homologous gene; enzyme.
 
 
 0.793
rfbF
Glucose-1-phosphate cytidylyltransferase; Function of strongly homologous gene; enzyme.
 
 
 0.764
XM1_0988
Glycosyltransferase, group 2 family protein; Function of strongly homologous gene; enzyme.
 
     0.733
XM1_0985
Putative pyridoxal phosphate-dependent transferase, major domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.723
XM1_0984
Putative NAD(P)-dependent oxidoreductase, GFO/IDH/MOCA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.709
XM1_0987
Putative acetyltransferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.673
XM1_0986
Conserved protein of unknown function （Acyl-CoA N-acyltransferases 159-306） Homologs of previously reported genes of unknown function.
       0.658
XM1_0989
Putative DegT/DnrJ/EryC1/StrS aminotransferase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.551
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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