STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1014Putative Lipid A core-O-antigen ligase and related enzymes; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (437 aa)    
Predicted Functional Partners:
XM1_1013
Homologs of previously reported genes of unknown function.
  
    0.781
XM1_1015
Putative methyltransferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.780
XM1_1012
Putative Membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
       0.773
XM1_1023
Putative Colanic acid exporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.704
cpsB
Mannose-1-phosphate guanyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.703
XM1_1266
Putative Glycosyltransferase(Glycosyl transferase, family 1,201-364); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.690
XM1_4438
Homologs of previously reported genes of unknown function.
  
     0.665
XM1_1616
Conserved protein of unknown function(Uncharacterised conserved protein UCP020408,314-408); Homologs of previously reported genes of unknown function.
  
  
 0.659
XM1_1348
Putative phasin family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.572
XM1_1006
Predicted nucleoside-diphosphate sugar epimerase; Function of strongly homologous gene; enzyme.
 
  
 0.562
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.