STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1046Glycosyltransferase(Glycosyl transferase, family 1,173-344;2-366); Function of strongly homologous gene; enzyme. (382 aa)    
Predicted Functional Partners:
XM1_1047
Xylanase/chitin deacetylase; Function of strongly homologous gene; enzyme.
     
 0.761
XM1_1045
Glycosyltransferase(1;153); Function of strongly homologous gene; enzyme.
  
 
 0.646
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.632
XM1_1018
Putative glycosyltransferase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.615
XM1_1044
Conserved protein of unknown function(3;342); Homologs of previously reported genes of unknown function.
       0.562
XM1_1025
Glycosyltransferase; Function of strongly homologous gene; enzyme.
  
     0.552
XM1_2052
Homologs of previously reported genes of unknown function.
 
     0.534
rkpK
UDP-glucose 6-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.515
rffG
dTDP-glucose 4,6-dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.515
XM1_1048
Uncharacterized protein; Homologs of previously reported genes of unknown function.
       0.509
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.