STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1072Putative thioesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (158 aa)    
Predicted Functional Partners:
bclA
Putative Benzoate--CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.955
XM1_2652
Putative Phenolpthiocerol synthesis polyketide synthase ppsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.947
hcl
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; Function of strongly homologous gene; enzyme.
 
 
 0.931
XM1_2264
Putative Thioesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.917
boxA
Benzoyl-CoA oxygenase component A; Function of strongly homologous gene; enzyme.
 
     0.916
XM1_0600
Putative 4-hydroxybenzoyl CoA thioesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.910
hcrC
Putative xanthine dehydrogenase, iron-sulfur subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.904
hcrB
Putative oxidoreductase with FAD-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.904
ubiA
4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
     
 0.904
hcrA
Putative 4-hydroxybenzoyl-CoA reductase subunit alpha; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.903
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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