STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1079Putative ABC-type multidrug transport system(ABC transporter-like,46-164); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (308 aa)    
Predicted Functional Partners:
XM1_1080
Putative ABC-type multidrug transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 0.997
XM1_1078
Membrane-fusion protein; Function of strongly homologous gene; membrane component.
  
 0.968
nosY
Membrane protein nosY; Function of strongly homologous gene; transporter.
  
 
 0.792
XM1_1077
Indolepyruvate ferredoxin oxidoreductase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.648
XM1_1838
Transport permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.644
XM1_2145
Nitrous oxidase accessory protein; Homologs of previously reported genes of unknown function.
 
 
 0.571
XM1_2791
Putative leucine/isoleucine/valine transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     
0.565
nosZ
Nitrous oxide reductase; Function of strongly homologous gene; enzyme.
  
 
 0.562
atpD
Membrane-bound ATP synthase, F1 sector, beta-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.539
nosL
Nitrous oxide reductase accessory protein; Function of strongly homologous gene; enzyme.
  
 
 0.529
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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