STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1107Putative SAM-dependent methyltransferases(Methyltransferase type 11,91-139); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (253 aa)    
Predicted Functional Partners:
yibF
Uncharacterized GST-like protein yibF (Thioredoxin-like fold 1-90; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
   
 0.700
XM1_3072
Conserved protein of unknown function(containing NYN domain, limkain-b1-type domain.8-165); Homologs of previously reported genes of unknown function.
 
     0.689
gloB
Hydroxyacylglutathione hydrolase(Hydroxyacylglutathione hydrolase,.6-257); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
 0.686
XM1_0124
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.617
XM1_0092
Homologs of previously reported genes of unknown function.
  
     0.609
holC
DNA polymerase III subunit chi; Function of strongly homologous gene; enzyme.
  
     0.571
XM1_1106
Conserved hypothetical protein, Putative Zinc finger CDGSH-type domain-containing protein; Homologs of previously reported genes of unknown function.
       0.550
XM1_4463
Conserved protein of unknown function (Lambda repressor-like, DNA-binding domain 6-91); Homologs of previously reported genes of unknown function.
  
     0.541
XM1_4134
Conserved protein of unknown function （Cell division protein ZapA-like 3-104） Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
   
 0.528
XM1_2186
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
   
 0.514
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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