STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1112Hemerythrin-like protein; Function of strongly homologous gene; transporter. (135 aa)    
Predicted Functional Partners:
XM1_0354
Conserved protein of unknown function （Hemerythrin-like iron-binding protein） Homologs of previously reported genes of unknown function.
  
   
 0.783
XM1_0458
Putative Bacteriohemerythrin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.774
XM1_2366
Putative Hemerythrin-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.774
XM1_3059
Conserved protein of unknown function(containing Haemerythrin-like, metal-binding domain.1-134); Homologs of previously reported genes of unknown function.
  
     0.774
XM1_2962
Putative bacteriohemerythrin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.773
XM1_3647
Hemerythrin; Function of strongly homologous gene; carrier.
  
     0.772
XM1_1113
LigB domain-containing protein; Homologs of previously reported genes of unknown function.
       0.630
XM1_2950
Putative bacterial hemerythrin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.607
XM1_2135
Hemerythrin-like protein; Homologs of previously reported genes of unknown function.
  
     0.560
XM1_1114
Transcriptional regulator(Winged helix-turn-helix transcription repressor DNA-binding,6-286); Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
       0.449
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.