STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1119Copper resistance D domain-containing protein(Copper resistance D,193-288); Function of strongly homologous gene; transporter. (529 aa)    
Predicted Functional Partners:
XM1_1118
Conserved exported protein of unknown function(Immunoglobulin E-set,23-116); Homologs of previously reported genes of unknown function.
 
  
 0.966
XM1_0992
Conserved protein of unknown function (FMN-binding split barrel-related 28-245; Homologs of previously reported genes of unknown function.
  
     0.652
XM1_1050
Homologs of previously reported genes of unknown function.
  
     0.643
XM1_3559
Putative thiol-disulfide isomerase/thioredoxins-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.642
XM1_1120
Putative TRAP-type uncharacterized transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.635
XM1_4404
Conserved exported protein of unknown function (Sialidases 52-296); Homologs of previously reported genes of unknown function.
  
     0.611
XM1_0363
Putative regulatory protein, FmdB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.603
XM1_1275
Conserved protein of unknown function（NERD,16-109） Homologs of previously reported genes of unknown function.
  
     0.572
XM1_4768
Homologs of previously reported genes of unknown function.
  
     0.554
XM1_4304
Conserved protein of unknown function (Concanavalin A-like lectin/glucanases superfamily; Homologs of previously reported genes of unknown function.
  
     0.533
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.